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Survival-associated eQTLs across different cancer types


We identified 22,212 eQTLs associated with patient overall survival across different cancer types at FDR < 0.05.


e.g., "STAD"
e.g., "rs1824937"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
log-rank test p-value
Sample size
Median survival time AA
Median survival time Aa
Median survival time aa
Dispaly
THCA rs388987 chr6:119138624 T/C 0.000266 484 16.23 14.27 21.77 KM Plot
THCA rs3890482 chr15:65840645 G/A 0.000136 482 15.9 15.08 16.23 KM Plot
THCA rs3893002 chr12:58127212 G/A 0.000163 488 14.97 17.88 16.8 KM Plot
THCA rs3909373 chr5:180670433 T/G 1.77E-5 487 16.02 15.67 14.15 KM Plot
THCA rs3917268 chr2:102778862 A/T 2.42E-8 483 15.97 14.63 26.07 KM Plot
THCA rs3917325 chr2:102793907 G/T 3.87E-7 490 25.03 14.7 15.93 KM Plot
THCA rs3917328 chr2:102794541 A/G 3.26E-6 490 19.43 14.82 15.93 KM Plot
THCA rs392131 chr8:144572758 A/G 1.85E-6 490 16.2 16.37 7.5 KM Plot
THCA rs3922338 chr19:43537378 C/T 3.12E-12 490 17.77 17.7 15.32 KM Plot
THCA rs3923434 chr4:88192112 G/A 0.000125 483 16.07 16.23 12.93 KM Plot
THCA rs3928557 chr19:43578661 T/A 0.000256 485 15.32 18.3 10.08 KM Plot
THCA rs3935946 chr3:67888766 A/G 0.000312 483 15.63 17.62 19.7 KM Plot
THCA rs3983739 chr12:13269946 A/G 6.58E-5 475 15.33 16.13 17 KM Plot
THCA rs3986311 chr15:41264339 C/G 0.000262 480 15.15 16.18 17.33 KM Plot
THCA rs4018508 chr12:49291155 A/T 0.000323 482 16.8 16.2 13.93 KM Plot